Vol. 337 No. 5 (2026)
DOI https://doi.org/10.18799/24131830/2026/5/5106
Mineral composition and geochemical features of choleoliths of Yakutia residents
Relevance. In recent years, the issue of sustainable and comfortable environmental conditions has been becoming increasingly relevant. Unfavourable environmental impacts lead to disruptions in the intake of chemical elements into the body, which, in its turn, contributes to the development of various pathologies. One such pathology is the formation of gallstones. Aim. To identify possible interrelations between the impact of natural lithogenic and anthropogenic factors and the structure, mineralogical, and trace element composition of human biominerals in sparsely populated areas of the North. Methods. Spectral methods of analysis, X-ray phase analysis, and statistical methods were used to examine the samples. Results and conclusions. The authors have studied the gallstones from inhabitants of the Republic of Sakha (Yakutia). They analyzed the mineralogical, macroelemental (K, Na), and microelemental (Mn, Cu, Pb, Ni, Zn, Cd, As, Ti, Bi, Zr, Au, Ta, Sb, Ga, W, Cr, Ge, Ba, Be, Nb, Sn, V, Mo, Li, La, In, Sc, Yb, Y, Ag, Co, Sr) composition of the gallstone samples. It was found that the concentrations of elements in gallstones are distributed in the following order: Na>K>Mn>Cu>Pb>Ni>Zn>Bi>Cd>As, which may indicate specific environmental or metabolic affects. The elemental concentrations followed the order Na > K > Mn > Cu > Pb > Ni > Zn > Bi > Cd > As, suggesting specific environmental or metabolic influences. The trace element results were compared with previously published data from Siberian regions of Russia and other countries. Additionally, the paper provides the data on the mineralogical composition of gallstones, which includes cholesterol and its derivatives, bilirubin, phosphate, and calcium carbonates (vaterite, calcite). The authors employed descriptive statistics to analyze possible relationships between mineral and trace element compositions, sex, age, and area of residence, allowing for a quantitative assessment of trace element variations during gallstone formation.
For citation: Legostaeva Ya.B., Vasileva T.I., Shadrinova O.V. Mineral composition and geochemical features of choleoliths of Yakutia residents. Bulletin of the Tomsk Polytechnic University. Geo Assets Engineering, 2026, vol. 337, no. 5, pp. 94-105. https://doi.org/10.18799/24131830/2026/5/5106
Keywords:
gallstones, cholesterol, vaterite, calcite, apatite, elemental composition, statistics
References:
1. Wang X., Yu W., Jiang G., Li H., Li S., Xie L., Bai X., Cui P., Chen Q., Lou Y., Zou L., Li S., Zhou Z., Zhang C., Sun P., Mao M. Global epidemiology of gallstones in the 21st century: a systematic review and meta-analysis. Clinical Gastroenterology and Hepatology, 2024, vol. 22, pp. 1586 –1595. DOI: 10.1016/j.cgh.2024.01.051.
2. Jayasoma K., Koralegedara N.H., Dharmapala A., Rohana C. Microstructural and geochemical characterization of gallstones: implications for biomineralization. Biological Trace Element Research, 2022, vol. 200, pp. 4891–4902. DOI: 10.1007/s12011-021-03076-4.
3. Volfson I.F., Prozorova M.V., Yakushina O.I., Pechenkin I.G., Kremkova E.V., Farkhutdinov I.M. Medical Geology: Status and Prospects of the Science in Russia and in NIS. Biogenic-abiogenic interactions in natural and anthropogenic systems Switzerland, 2022, pp. 559–571. DOI: 10.1007/978-3-031-40470-2_33.
4. Golovanova O.A., Yudina L.N., Borbat V.F. Determination of the components of gallstones and parameters of the stone-forming environment. Chemistry and Chemical Technology, 2004, vol. 47, pp. 125–129. (In Russ.)
5. Palchik N.A., Moroz T.N., Daryin A.V. Trace element and mineral composition of pathogenic biomineral concretions: data from SR-XRF, powder X-ray diffraction, and vibrational spectroscopy. Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 2009, vol. 603, pp. 141–143. (In Russ.) DOI: 10.1016/j.nima.2008.12.179.
6. Krivonosov Yu.S., Asadchikov V.E., Buzmakov A.V., Ivanova A.G., Artemov V.V., Rusakov A.A., Pantyushov V.V., Sayfutdinov R.G., Minaev N.V., Minaeva S.A., Syachina M.A., Popov V.K. Physical Methods for Determining the Phase Composition of Gallstones. Crystallography Reports, 2019, vol. 64, pp. 920–925. DOI: 10.1134/S1063774519060117.
7. Finkelman R.B., Centeno J.A., Selinus O., Pereira J.J. Medical Geology: an emerging discipline. Environmental Health Focus – Managing the Environment for Health in the Asia Pacific, 2004, vol. 2, pp. 21–28.
8. Golovanova O.A., Frank-Kamenetskaya O.V., Punin Yu. Features of pathogenic mineral formation in the human body. Russian Journal of General Chemistry, 2010, vol. 54, pp. 124–136. (In Russ.)
9. Zhang Q., Li Y., Hu H., Tian M., Cao T., Wu H., Wu W., Zhang G. Serum arsenic augments gallstone risk in Henan rural cohort with multiple metal exposure. Science of The Total Environment. 2024, Vol. 952, P. 175991. DOI: 10.1016/j.scitotenv.2024.175991.
10. Palchik N.A., Stolpovskaya V.N., Leonova I.V., Shkuratov S.S., Grigorieva T.N., Isaenko V.I., Isaenko I.V., Miroshnichenko L.V. Features of the mineral composition and structure of urinary stones and their prevalence in patients from different districts of the Novosibirsk region. Mineralogy of Technogenesis, 2001, no. 2, pp. 99–108. (In Russ.)
11. Petrova M.N. Features of seasonal nutrition in Yakutia. International Journal of Applied and Fundamental Research, 2018, vol. 10, pp. 84–90. (In Russ.) DOI: 10.17513/mjpfi.12421.
12. Korago A.A. Introduction to Biomineralogy. St Petersburg, Nedra Publ., 1992. 280 p. (In Russ.)
13. Yasukawa K., Ohta J., Hamada M., Chang Q., Nakamura H., Ashida K., Takaya Y., Nakamura K., Iwamori H., Kato Y. Essential processes involving REE-enrichment in biogenic apatite in deep-sea sediment decoded via multivariate statistical analyses. Chemical Geology, 2022. vol. 614, pp. 121184.
14. Tarasenko N.Yu., Vorobyova R.S., Shabalina L.P., Tsvetkova R.P. Cadmium in the environment and its effect on calcium metabolism. Hygiene and Sanitation, 1975, vol. 9, pp. 22–25. (In Russ.)
15. Golovanova O.A. Pathogenic mineral formation in the human body. Bulletin of the Tomsk Polytechnic University, 2009, vol. 315, no. 3, pp. 51–56. (In Russ.)
16. Bali G.P.K., Singh B., Ashraf M., Kamalanathan T. Factors prevailing for gallstone formation. Gallstone Formation, Diagnosis, Treatment and Prevention. London, Elsevier Inc. 2024. pp. 39–50. DOI: 10.1016/B978-0-443-16098-1.00005-9.
17. Golovanova O.A., Palchik N.A., Berezina N.Yu., Yudina L.N. Comparative characteristics of the mineral and trace element composition of gallstones removed from patients in the Novosibirsk and Omsk regions. Chemistry for Sustainable Development, 2006, vol. 14. pp. 125–131. (In Russ.)
18. Ashok M., Rautray T., Nayak P., Vijayan V., Jayanthi V., Narayana Kalkura S. Energy dispersive X-ray fluorescence analysis of gallstones. Journal of Radioanalytical and Nuclear Chemistry, 2003, vol. 257, pp. 333–335. DOI: 10.1023/a:1024735930031.
19. Parviainen A., Roman-Alpiste M.J., Marchesi C., Suárez-Grau J.M., Pérez-López R. New insights into the metal partitioning in different microphases of human gallstones. Journal of Trace Elements in Medicine and Biology, 2017, vol. 44. pp. 339–348. DOI: 10.1016/j.jtemb.2017.09.013.
20. Völzke H., Baumeister S.E., Alte D., Hoffmann W., Schwahn C., Simon P., John U., Lerch M.M. Independent risk factors for gallstone formation in a region with high cholelithiasis prevalence. Digestion, 2005, vol. 71, pp. 97–105. DOI: 10.1159/000084525.
21. Pak M., Lindseth G. Risk factors for cholelithiasis. Gastroenterology Nursing, 2016, vol. 39, pp. 297–309. DOI: 10.1097/SGA.00000000000000235.
22. Grigorieva I.N., Ragino Yu.I., Malyutina S.K. On the association between coronary heart disease and cholelithiasis (epidemiological study). Atherosclerosis, 2019, vol. 15, pp. 32–38. (In Russ.) DOI: 10.15372/ATER20190205.
23. Littlefield A., Lenahan C. Cholelithiasis: presentation and management. Journal of midwifery and women's health, 2019, vol. 64, pp. 289–297. DOI: 10.1111/jmwh.12959.
24. Peter A., Cozmuta L.M., Nicula C., Cozmuta A.M., Vulpoi A., Barbu-Tudoran L., Magyari K., Todea M., Baia L., Pop F.G. Multi-analyses of gallstones and correlation between their properties with the laboratory results. Analytical Biochemistry, 2020, vol. 593. pp. 113587. DOI: 10.1016/j.ab.2020.113587.
25. Kostova I. The role of biogenic metal complexes in living organisms. Inorganics, 2023, vol. 11, pp. 56. DOI: 10.3390/inorganics11020056.
26. Alatise O.I., Obiajunwa E.I., Lawal O.O., Adesunkanmi A.R.K. Particle-induced X-ray emission (PIXE) analysis of minor and trace elements in gallstones of Nigerian patients. Biological Trace Element Research, 2010, vol. 134, pp. 13–24. DOI: 10.1007/s12011-009-8453-3.
27. Athanasiadou D., Godelitsas A., Sokaras D., Karydas A.G., Dotsika E., Potamitis C., Zervou M., Xanthos S., Chatzitheodoridis E., Gooi H.C., Becker U. New insights into the chemical and isotopic composition of human-body biominerals. I: Cholesterol gallstones from England and Greece. Journal of Trace Elements in Medicine and Biology, 2013, vol. 27, pp. 79–84.
28. Jaswal B.B.S., Rai P.K., Singh T., Zorba V., Singh V.K. Detection and quantification of heavy metal elements in gallstones using X‐ray fluorescence spectrometry. X‐Ray Spectrometry, 2019, vol. 48. pp. 178–187. DOI: 10.1002/xrs.3010.
29. Shareef K., Omar L., Garota S. Correlation between the Chemical Components of Gallstones and Sera of Stone Formers. Journal of Medical Sciences, 2009, vol. 7. pp. 1–6.
30. Berezkina E.S., Lakarova E.V., Lomakin Yu.V., Skalny A.V. Current issues in analytical research in bioelementology. Issues of Biological, Medical, and Pharmaceutical Chemistry, 2011, vol. 6. pp. 14–18. (In Russ.)
31. Gorbunov A.V., Lyapunov S.M., Okina O.I., Frontasyeva M.V., Pavlov S.S. Nuclear and related analytical methods in ecology: the influence of geoecological factors on the balance of trace elements in the human body. Physics of Particles and Nuclei, 2012, vol. 43, pp. 783–824. DOI: 10.1134/S1063779612060044.
32. Skinner H.C.W., Ehrlich H. Biomineralization. Treatise on Geochemistry, 2007, vol. 10, pp. 1–69. DOI: 10.1016/B978-0-08-095975-7.00804-4.
33. Njeze G.E. Gallstones. Nigerian Journal of Surgery, 2013, vol. 19, pp. 49–55. DOI: 10.4103/1117-6806.119236.
34. Yu J.K., Pan H., Huang S.M., Huang N.L., Yao C.C., Hsiao K.M., Wu C.W. Calcium content of different compositions of gallstones and pathogenesis of calcium carbonate gallstones. Asian journal of surgery, 2013, vol. 36, no. 1. pp. 26–35. DOI: 10.1016/j.asjsur.2012.06.001.
35. Sazonov N.N., Timofeev S.M. Biogeochemical zoning of the plain territories of Yakutia. Trends in the Development of Science and Education, 2018, vol. 43, pp. 67–70. (In Russ.) DOI: 10.18411/lj-10-2018-173.
36. Makarov V.N. Geochemical fields in the cryolithozone. Yakutsk, Melnikov Permafrost Institute Publ., 1998. 116 p. (In Russ.)
37. Savvinov G.N., Legostaeva Ya.B., Markova S.V. The influence of natural anomalies in the ecosystem on the formation of microelementoses in the middle reaches of the Vilyuy River. Natural Resources of the Arctic and Subarctic, 2006, vol. 3, pp. 126–134. (In Russ.)
38. Gololobova A., Legostaeva Yа., Popov V., Makarov V., Shadrinova O. Geochemical Characteristics of Soils to the Impact of Diamond Mining in Siberia (Russia). Minerals, 2022, vol. 12, pp. 1518. DOI: 10.3390/min12121518.
39. Gololobova A., Legostaeva Ya. An assessment of the impact of the mining industry on soil and plant contamination by potentially toxic elements in boreal forests. Forests, 2023, vol. 14, pp. 1641. DOI: 10.3390/f14081641.
40. Legostaeva Ya.B., Gololobova A.G. Long-term geochemical monitoring of the soil cover in the impact zone of diamond mining enterprises: a case study in the Nakyn kimberlite field, Russia. Environmental Monitoring and Assessment, 2021, vol. 193, pp. 337. DOI: 10.1007/s10661-021-09087-x.
41. Chevychelov A.P., Sobakin P.I., Gorokhov A.N. Radioactive rock dumps in the Elkon uranium ore district (Southern Yakutia). Geography and Natural Resources, 2020, vol. 41, pp. 18–25. (In Russ.) DOI: 10.1134/S1875372820010035.
42. Sivtseva N.E. Geochemical studies of anthropogenically altered soils in Yakutsk. Problems of Regional Ecolog, 2018, vol. 6. pp. 36–39. (In Russ.) DOI: 10.24411/1728-323X-2019-16036.


